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Dr Louise Teixeira Cerdeira

Research Software Engineer

United Kingdom

B.Sc. in Computer Science, M.Sc. in Bioinformatics and a PhD in Sciences at the University of S茫o Paulo in 2019 (with honours). More than ten years of experience in IT, Innovation, Research and Bioinformatic Strategic projects at private and public companies. Broad expertise in analyze WGS data (genome, transcriptomic and metagenome) and use comparative genomics techniques to investigate the diversity of pathogenic bacteria (ESKAPE) using One Health approach. In the last year have been working on developing tools to build a portable, low cost and sufficiently fast embedded system (GPU-based) to help reduce the data processing time, providing feasible and democratic sequencing analysis for LMIC. Co-developed the OneBR project and led the bioinformatics infrastructure and web architecture; also, bioinformatics scientist in others medium and/or large research projects (Brazil, Australia, Africa, UK, USA, Argentina, Peru and Chile), funded by the Bill & Melinda Gates Foundation, Ministry of Health, CNPQ, FAPESP and Capes.

Affiliations

Department of Infection Biology
Faculty of Infectious and Tropical Diseases

Research

Research Area
Bioinformatics
Microbiology
Genomics
IT and computing

Selected Publications

Dennis, TP W; Pescod, P; Barasa, S; CERDEIRA, LT; Lucas, ER; Clarkson, CS; Miles, A; Asidi, A; Manzambi, EZ; Metelo, E; Zanga, J; Nsalambi, S; Irish, SR; Donnelly, MJ; Agossa, F; Weetman, D; Tezzo, FW;
2024
Scientific reports
DYSON, Z; CERDEIRA, L; Sharma, V; CAREY, M; HOLT, K; Global Typhoid Genomics Consortium,;
2024
bioRxiv
Dennis, TP W; Pescod, P; Barasa, S; CERDEIRA, L; Lucas, ER; Clarkson, CS; Miles, A; Asidi, A; Manzambi, EZ; Metelo, E; Zanga, J; Nsalambi, SN; Irish, SR; Donnelly, MJ; Agossa, F; Weetman, D; Tezzo, FW;
2024
Cold Spring Harbor Laboratory
CERDEIRA, L; Sharma, V; Maranga, M; CAREY, M; DYSON, ZA; HOLT, KE;
2024
Zenodo
Lucas, ER; Nagi, SC; Egyir-Yawson, A; Essandoh, J; Dadzie, S; Chabi, J; Djogb茅nou, LS; Medjigbodo, AA; Edi, CV; K茅toh, GK; Koudou, BG; Van't Hof, AE; Rippon, EJ; Pipini, D; Harding, NJ; Dyer, NA; CERDEIRA, LT; Clarkson, CS; Kwiatkowski, DP; Miles, A; Donnelly, MJ; Weetman, D;
2023
Nature communications
CAREY, ME; DYSON, ZA; Argim贸n, S; CERDEIRA, L; Yeats, C; Aanensen, D; Mboowa, G; Baker, S; Tessema, SK; Smith, AM; Okeke, IN; HOLT, KE;
2023
Open forum infectious diseases
Foo, A; CERDEIRA, L; Hughes, GL; Heinz, E;
2023
Wellcome open research
Dias, JB; Soncini, JG M; CERDEIRA, L; Lincopan, N; Vespero, EC;
2022
The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases
Damas, MS F; Ferreira, RL; Campanini, EB; Soares, GG; Campos, LC; Laprega, PM; Soares da Costa, A; Freire, CC D M; Pitondo-Silva, A; CERDEIRA, LT; Da Cunha, AF; Pranchevicius, M-CD S;
2022
Frontiers in medicine
Soncini, JG M; CERDEIRA, L; Sano, E; Koga, VL; Tizura, AT; Tano, ZN; Nakazato, G; Kobayashi, RK T; Aires, CA M; Lincopan, N; Vespero, EC;
2022
Scientific reports