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Prof Anthony Scott

Professor of Vaccine Epidemiology

United Kingdom

I am a clinician and epidemiologist with an interests in infectious diseases and vaccinology. I trained in Infectious Diseases in London and Newcastle and in Epidemiology at LSHTM. Since 1993 I have worked almost continuously at the KEMRI-Wellcome Trust Research Programme in Kilifi, Kenya both as researcher and clinician. Between 1998-1999 I spent two years at the Respiratory Diseases Branch of the US CDC in Atlanta. Between 1998 and 2012 I was based at the Nuffield Department of Clinical Medicine in Oxford; since 2013 I have been based at the School. Since 2016 I have been supporting the development of a new research centre, the Hararghe Health Research partnership, in Harar, Ethiopia - a collaboration between LSHTM and Haramaya University. I have directed the NIHR Health Protection Research Unit in Immunisation since 2014 and, from 2013-2023, I was a member of the UK vaccine policy committee, JCVI. I continue to do vaccine policy work on the WHO strategic advisory group of experts in vaccines and immunisation.

Affiliations

Department of Infectious Disease Epidemiology and International Health
Faculty of Epidemiology and Population Health

Centres

Vaccine Centre
Antimicrobial Resistance Centre

Teaching

Each summer, since 2014, I have co-directed a two week intensive short course with Stefan Flasche under the title: "Epidemiological Evaluation of Vaccines: Efficacy, Safety and Policy". I lecture on infectious diseases, surveillance, disease burden assessment, pneumonia and pneumococcal diseases on a variety of MSc modules including Epidemiology of Infectious Diseases, Clinical Bacteriology and Vaccine Immunology.

Research

Since the early 1990s I have researched the aetiology of pneumonia in adults and children and the causes of death in children, with a focus on East Africa. I have measured the impact of new conjugate vaccines for H. influenzae type b and Pneumococcus against invasive bacterial disease, meningitis and pneumonia. I have used carriage studies and modelling to understand the transmission of pneumococci and the indirect effects of conjugate vaccines. I have also undertaken Phase I/II vaccine studies of new vaccines against pneumococcus and non-typhoidal salmonella and studied the immunogenicity of pneumococcal conjugate vaccines given to newborn children, and given in fractional doses to older children. In Eastern Ethiopia, I have described the causes of death in children aged <5 years and in Kenya I have followed the long term mortality impacts of new vaccines and the COVID-19 pandemic in the Kilifi HDSS. I have used seroepidemiological studies to define population immunity to pneumococcus and SARS-CoV-2. In the UK I have overseen a programme of policy-relevant research to assist JCVI, UKHSA and NHS England to introduce new vaccines and optimise existing vaccine programmes.
Research Area
Epidemiology
Infectious disease policy
Vaccinology
Immunisation
Serology, vaccines
Disease and Health Conditions
Pneumonia
Meningitis
COVID-19
Country
United Kingdom
Kenya
Ethiopia
Region
Sub-Saharan Africa (developing only)

Selected Publications

Uyoga, S; ADETIFA, IM O; Karanja, HK; Nyagwange, J; Tuju, J; Wanjiku, P; Aman, R; Mwangangi, M; Amoth, P; Kasera, K; Ng'ang'a, W; Rombo, C; Yegon, C; Kithi, K; Odhiambo, E; Rotich, T; Orgut, I; Kihara, S; OTIENDE, M; BOTTOMLEY, C; Mupe, ZN; Kagucia, EW; GALLAGHER, KE; Etyang, A; VOLLER, S; ... Warimwe, GM.
2020
Science
Pneumonia Etiology Research for Child Health (PERC,;
2019
The Lancet
Ong'ayo, G; OOKO, M; Wang'ondu, R; BOTTOMLEY, C; Nyaguara, A; Tsofa, BK; Williams, TN; Bejon, P; SCOTT, JA G; Etyang, AO;
2019
The Lancet Global Health
OJAL, J; Griffiths, U; Hammitt, LL; ADETIFA, I; Akech, D; Tabu, C; SCOTT, JA G; FLASCHE, S;
2019
The Lancet Global Health
Etyang, AO; Kapesa, S; Odipo, E; Bauni, E; Kyobutungi, C; Abdalla, M; Muntner, P; Musani, SK; Macharia, A; Williams, TN; Cruickshank, JK; SMEETH, L; SCOTT, JA G;
2019
Journal of the American Heart Association
Silaba, M; OOKO, M; BOTTOMLEY, C; Sande, J; Benamore, R; Park, K; Ignas, J; Maitland, K; Mturi, N; Makumi, A; OTIENDE, M; Kagwanja, S; Safari, S; Ochola, V; Bwanaali, T; Bauni, E; Gleeson, F; Deloria Knoll, M; ADETIFA, I; Marsh, K; Williams, TN; Kamau, T; Sharif, S; Levine, OS; Hammitt, LL; ... SCOTT, JA G.
2019
The Lancet Global Health
Hammitt, LL; Etyang, AO; Morpeth, SC; OJAL, J; Mutuku, A; Mturi, N; Moisi, JC; ADETIFA, IM; Karani, A; Akech, DO; OTIENDE, M; Bwanaali, T; Wafula, J; Mataza, C; Mumbo, E; Tabu, C; Knoll, MD; Bauni, E; Marsh, K; Williams, TN; Kamau, T; Sharif, SK; Levine, OS; SCOTT, JA G;
2018
Lancet
Gilchrist, JJ; Rautanen, A; Fairfax, BP; Mills, TC; Naranbhai, V; Trochet, H; Pirinen, M; MUTHUMBI, E; Mwarumba, S; Njuguna, P; Mturi, N; Msefula, CL; Gondwe, EN; MacLennan, JM; Chapman, SJ; Molyneux, ME; Knight, JC; Spencer, CC A; Williams, TN; MacLennan, CA; SCOTT, JA G; Hill, AV S;
2018
Nature communications
Brent, AJ; Nyundo, C; Langat, J; Mulunda, C; Wambua, J; Bauni, E; Sande, J; Park, K; Williams, TN; Newton, CR J; Levin, M; SCOTT, JA G; KIDS TB Study Group,;
2018
Emerging infectious diseases
OJAL, J; Goldblatt, D; Tigoi, C; SCOTT, JA G;
2017
Clinical infectious diseases